# To deactivate an active environment, use Salloc: Waiting for resource configurationĭue to MODULEPATH changes, the following have been reloaded:ġ) ~]$ module load ~]cd ~]$ conda create -name march5-testĬollecting package metadata (current_repodata.json): doneĮnvironment location: /ocean/projects/ groupname/username/.conda/envs/march5-test Salloc: job 357591 has been allocated resources Salloc: job 357591 queued and waiting for resources Salloc -J Interact -partition RM-small,RM-shared ~]$ interactĪ command prompt will appear when your session begins This example session on Bridges-2 creates a new environment and installs fitsio. Use the conda create command to create your new environment.Type module spider anaconda on Bridges-2 to see what versions are available. Move to your ocean space ($PROJECT) to allow enough file space.Get an interactive session with the interact command.
#ANACONDA CONDA INSTALL PACKAGE INSTALL#
If you need additional software, you can create a new environment and install it there. Once it has, create a symbolic link to direct all new Anaconda environments to be created with the appropriate command: ln -s $PROJECT/.conda $HOME/.conda Adding to an environment conda directory and its contents to $PROJECT, use the appropriate command: mv $HOME/.conda $PROJECT/.conda conda batch_defaults.out examples move your. Because the subdirectory name begins with a “.”, you need the -a flag to the ls command to see it: ls -a Check if you have environments in your home directory by looking for a. If you have already created some there, they should be moved to $PROJECT. We recommend working in your ocean space ($PROJECT) on Bridges-2 as your quota there is much larger.īy default, Anaconda environments are created in your home directory space. Your home directory has limited space, and Anaconda environment files can be very large. To use Anaconda, include a command like this in your batch script or interactive session to load the Anaconda module: module load anaconda-versionīe sure you also load any other modules needed, as listed by the module help or module spider anaconda command.
#ANACONDA CONDA INSTALL PACKAGE HOW TO#
To see what other modules are needed, what commands are available and how to get additional help type module spider anaconda-version # on Bridges-2 Note that anaconda 2 modules use python 2 and anaconda 3 modules use python 3. To see what versions of Anaconda are available, type module spider anaconda In addition, environments tailored for AI applications which include Anaconda and other popular AI/Machine Learning/Big Data packages, such as TensorFlow, Theano, Keras, pandas, opencv, scikit-learn, and more are set up for you to use. Multiple versions of Anaconda are available on Bridges-2. Anaconda is a data science platform which includes Python and R.
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